WaspAtlas A Nasonia vitripennis gene database





Downloads


Sequence downloads

Downloads (where available) for full transcripts, coding sequences, and UTRs.

Official gene set v1.2 EvidentialGene dataset NCBI (Nvit v2.0) NCBI (Nvit v2.1)
Full transcript sequences ogsv1.2_full_transcript_seqs.fa
(17,373 sequences)
EG_full_transcript_seqs.fa
(44,228 sequences)
NCBIv2.0_full_transcript_seqs.fa
(12,989 sequences)
NCBIv2.1_full_transcript_seqs.fa
(24,672 sequences)
Coding sequences ogsv1.2_coding_seqs.fa
(17,174 sequences)
EG_coding_seqs.fa
(44,227 sequences)
NCBIv2.0_coding_seqs.fa
(12,988 sequences)
NCBIv2.1_coding_seqs.fa
(24,671 sequences)
5' UTR sequences ogsv1.2_5utr_seqs.fa
(1,504 sequences)
EG_5utr_seqs.fa
(40,485 sequences)
NCBIv2.0_5utr_seqs.fa
(10,077 sequences)
NCBIv2.1_5utr_seqs.fa
(21,787 sequences)
3' UTR sequences ogsv1.2_3utr_seqs.fa
(9,048 sequences)
EG_3utr_seqs.fa
(40,162 sequences)
NCBIv2.0_3utr_seqs.fa
(10,370 sequences)
NCBIv2.1_3utr_seqs.fa
(21,864 sequences)

Housekeeping genes spreadsheet

Housekeeping_genes_v2.1.xlsx
A spreadsheet containing, for different tissues and conditions, a list of the genes with the lowest coefficients of variance (COV) across samples (i.e. the most stably expressed genes), to be used as robust reference genes for applications such as qPCR. The genes are ordered in order of stability (the most stable first).

Expression data sample information spreadsheet

Expression_sample_sheet_waspatlas_v2.1.xlsx
A spreadsheet containing information about the RNA-seq sample sets used in the expression data section of WaspAtlas.

Full WaspAtlas loci & gene mappings

Full_waspatlas_loci_v2.0.txt
Information about the mappings and how they were generated can be found here.